**1.2 Traditional and emerging animal models**

Classical animal models, including species that represent major branches of the tree of life, are being used in biological studies. They include *Caenorhabditis elegans* (a nematode), *Drosophila melanogaster* (an arthropod), *Danio rerio* (a teleost fish), *Gallus gallus* (an avian), and *Mus musculus* (a mammal). They have been widely used in scientific research, primarily due to the ease of maintenance and specific features that facilitate experimental manipulations, genetic study and observation. As knowledge from these models has accumulated over the years, they offer important insights into the overall organization and functional composition of the general form of life. However, a comprehensive picture of variations of mechanistic innovation in the vast diversity of species in the Animal Kingdom is not available. Greater understanding of these organisms in different branches of the phylogenetic tree is in demand, in order to fill the gaps of existing findings. To meet this demand, more model organisms are emerging to provide unique perspectives of animal development and specific biological functions not yet uncovered in the study of other classical models. Emerging animal models include the brine shrimp *Artemia sinica*, starlet sea anemone *Nematostella vectensis*, non-parasitic flatworm *Planaria*, amphioxus *Branchiostoma floridae*, sea squirt *Ciona intestinalis*, sea lamprey *Petromyzon marinus*, Japanese

Cryopreservation of Embryos from Model Animals and Human 261

Modern evolutionary developmental biology and molecular genetic studies on model organisms largely rely on manipulation of tissues and genomes. The advancement of technologies for genomic modification of these model organisms, in turn, affects the popularity of usage of particular model organisms. Eventually, this leads to a rapid increase

For the *Caenorhabditis* Genetic Center, mutants had been deposited by individual research groups and various genome wide mutagenesis projects such as the National BioResource Project for The Nematode and *Caenorhabditis elegans* Gene Knockout Consortium. In the National BioResource Project, random mutagenesis was performed for nematodes with UV in the presence of trimethylpsoralen. Affected genes are identified by screening with a genespecific primer set (Gengyo-Ando & Mitani, 2000). As of April 2010, about 4,400 mutants were available and mutants of some 2800 genes were being screened. Without convenient procedures for cryopreserving these species, maintenance of these strains is a heavy burden to these centers, and in other laboratories using these mutants extensively for their studies. On the other hand, passaging parasitic nematode models in plants and in donor animals, e.g., *Cooperia oncophora* in the cattle host (Borgsteede & Hendriks, 1979), is particularly labor

At Bloomington *Drosophila* Stock Center, more than 30,000 strains of *Drosophila* are currently present. Preparations are in progress to expand the facility to hold up to 70,000 stocks in order to meet the needs of stocking transgenic strains to be generated for a wide range of studies, including those made by tissue specific knocking-out of genes for the modeling of human diseases. In Flybase, 112,278 fly stocks were recorded for 2011 (Flybase FB2011\_07

In The Jackson Laboratory, over 4,000 mouse strains have been deposited and are available to the public. At the Medical Research Council Harwell and at The European Mouse Mutant Archive, over 1300 and 2200 mouse strains are stocked respectively (Eppig & Strivens, 1999). In various mouse stock centers in Japan, including BioResources Center (Riken) and Trans Genic Inc., about 8,000 mouse strains are stocked. More than 16,000 of the 24,954 protein coding genes in the mouse genome have been modified by the International Knockout Mouse Consortium (IKMC), as conditional knockout alleles in embryonic stem cells. So far, more than 1,000 mutant mice, each containing one of these conditional knockout alleles, are made available to the community. The ultimate goal is to generate different targeted alleles in embryonic stem cells (for targeted mice generation) or in targeted mice, to be available to the research community worldwide (Skarnes et al., 2011). On the other hand, about 1,200 zebrafish lines and about 100 *Xenopus* lines have been archived in the Zebrafish

International Resource Center and European *Xenopus* Resource Centers, respectively.

Since keeping live animals is costly in terms of requirements of space, consumables and manpower, strains not being used need to be cryopreserved to reduce the running cost. It is, therefore, a very important technology that keeps various genome-wide knockout consortia

in the number of transgenic/mutant strains in each popular species.

intensive and costly and poses risk of cross contamination.

affordable to average research laboratories.

**1.3 Needs for cryopreservation** 

Release Notes).

**1.3.1 Archives of genetic resources** 

quail *Coturnix japonica*, opossum *Monodelphis domestica* and marmoset *Callithrix jacchus*, etc. For example, sea lampreys are cyclostomes in a basal group of vertebrates. Comparative studies on lamprey and jawed fish, e.g., zebrafish, reveal key elements guiding jaw evolution. Characteristics shared between lamprey and other vertebrates but absent in nonvertebrate chordates include the presence of neural crest cells and a jaw. Comparative studies can direct us to the origins of these features. Therefore, study of these emerging model organisms does offer a unique approach to understand the relatedness of species in the living world. Another example illustrating the importance of new model systems in studying the evolution of body plan is shown in Figure 1 (Kosik, 2009).

Fig. 1. The identification of miRNAs in different metazoan lineages revealed that the number of microRNAs (in brackets) is generally correlated with the complexity of body plan. Comparative studies involving "non-classical" model organisms further suggested a possible role of new microRNAs in evolutionary innovation. The figure is reproduced from Kosik (2009) with permission from the publisher.
